Using a three-factor orthogonal design, we investigated the transcriptomic and histological responses of triploid rainbow trout (Oncorhynchus mykiss) gills across three salinities (10, 20, and 30 ppt) over 60 days, with temperature and body size as background conditions. Results showed that 20 ppt was associated with extensive transcriptional reprogramming, with 3333 differentially expressed transcripts (DETs), whereas 30 ppt...

Rainbow trout (Oncorhynchus mykiss) is an important cold-water aquaculture species and a tractable salmonid model for functional genomics. Rapid advances in chromosome-level genome assemblies, genetic variation resources, regulatory annotations, tissue and cell models, controlled challenge systems, and genome-editing technologies have established an increasingly integrated framework for linking genomic variation with measurabl...

Large-scale fishing bans are increasingly implemented to restore aquatic ecosystems, yet their effects on lower trophic levels remain poorly understood. As one of the world’s largest estuarine systems, the Yangtze River Estuary has been subjected to a ten-year fishing ban since 2021, providing a unique opportunity to potentially examine the response of plankton community to reduced fishing pressure along a steep salinity–nutri...

(1) Background: Vaccination is crucial for Ctenopharyngodon idella, yet the impact of delivery methods on welfare and immunity requires investigation. (2) Methods: This study compared manual (HI-V) and automated (AI-V) injections of inactivated Aeromonas hydrophila vaccine. (3) Results: Both methods induced protective immunity, with AI-V achieving a slightly higher Relative Percent Survival (41.67%) than HI-V (37.84%). AI-V pr...

Visceral white spot disease caused by Pseudomonas plecoglossicida poses a severe threat to large yellow croaker (Larimichthys crocea) aquaculture. This study investigated the immunomodulatory effects and underlying mechanisms of Pseudostellaria heterophylla extract against P. plecoglossicida infection in L. crocea. Fish were fed a basal diet supplemented with 1% P. heterophylla extract for 30, 45, and 60 days, followed by intr...

The Chinese bahaba (Bahaba taipingensis), an endangered marine fish, is highly vulnerable to infectious spleen and kidney necrosis virus (ISKNV). In this work, we developed a gill filament-derived cell line, designated BTG, to investigate how these cells respond to ISKNV over time, specifically from 3 to 24 h post-infection (hpi). BTG cells grew steadily, displayed a diploid chromosome number of 2n = 48, demonstrated high tran...

Neolissochilus heterostomus, a cyprinid fish endemic to Yunnan Province, China, is highly valued for both ornamental and edible purposes, yet its wild populations are currently declining and classified as endangered. In this study, we present a chromosome-level genome assembly of N. heterostomus, utilizing the PacBio HiFi and Hi-C strategies. The assembled genome spans 1793.99 Mb and is anchored to 50 chromosomes, comprising a...

The sustainable production of yellow catfish (Pelteobagrus fulvidraco) fry is critical for aquaculture, yet early developmental stages face high mortality and nutritional challenges. This study evaluated the effects of dietary supplementation with broken-cell wall P. rhodozyma on growth performance, organ development, enzyme activities, and gut microbiota composition in yellow catfish fry. Dietary supplementation with broken-c...

To determine the optimal water temperature range for artificial breeding and early development of Osteochilus salsburyi, six water temperature gradients (14, 18, 22, 26, 30, and 34 °C) were set to systematically investigate the effects of water temperature on artificial reproduction efficiency, embryonic development, the morphology of newly hatched larvae, larval growth performance, and the timing of organ development in O. sa...

Efficient detection of fish diseases is essential for intelligent health monitoring and timely intervention in aquaculture. However, current computer vision models remain computationally intensive, hindering their deployment on resource-constrained edge devices in aquaculture applications. To this end, this study developed a lightweight detection framework based on an improved You Only Look Once (YOLO), aiming to achieve a fav...

Water-soluble pectin (WSP) is a soluble dietary fiber with a high esterification degree and certain viscosity and emulsifying properties. It has diverse bioactivities—including antioxidant, anticancer, and anti-inflammatory properties. This study aimed to investigate the in vitro antioxidant mechanisms of water-soluble pectin, and the in vivo effects of intestinal antioxidant capacity and gut microbiota composition in hybrid g...

This 90-day trial evaluated the integrated benefits of biofloc technology (BFT) in lined ponds for intensive Penaeus vannamei culture, comparing it with a conventional water-exchange (WE) system. The BFT system maintained favorable water quality with a 68.4% reduction in cumulative water exchange. Concentrations of toxic total ammonia–nitrogen (TAN) and nitrite–nitrogen (NO2−-N) were better controlled, and total suspended soli...

The molting of crustaceans is accompanied by exoskeleton reconstruction. To reveal the molecular regulation mechanism of exoskeleton remodeling, the transcriptomic profiles of the exoskeleton across the entire molting process in the red swamp crayfish Procambarus clarkii were investigated by RNA sequencing, yielding a total of 7671 differentially expressed genes (DEGs) across five different molting stages. Notably, the key DEG...

Cascade hydropower development in the upper Yangtze River has substantially altered riverine habitat conditions. However, quantitative information on fish substrate preferences remains limited. Based on field surveys, six representative substrate types were identified in the Yibin and Jiangjin reaches, and substrate selection patterns of Leptobotia elongata were quantified under controlled flume conditions. This study examined...

This review examines the status, challenges, and future trajectories of global mussel aquaculture within the blue food system. Despite steady production growth, mussels’ relative contribution to total bivalve output has significantly declined over recent decades due to disproportionate expansion of oyster, clam, and scallop sectors. A major geographical production shift has occurred, with Asia, spearheaded by China, emerging a...

Litopenaeus vannamei, a widely cultivated aquatic species worldwide, has its growth status intrinsically tied to the economic profitability of the aquaculture industry. However, infection by the microspondian parasite Enterocytozoon hepatopenaei (EHP) has emerged as a pivotal threat to the healthy growth of these shrimp. Through transcriptome sequencing, this study identified substantial alterations in gene expression patterns...

Polystyrene microplastic (PS-MP) particles disrupt aquatic biological systems due to their persistence and high bioaccumulation potential, causing structural damage and inflammatory responses. PS-MPs also act as metabolic disruptors, affecting glucose metabolism and insulin signaling, although the mechanisms underlying these effects remain unclear. In this study, grass carp were exposed to 100 μg/L and 400 μg/L of polystyrene...

The kinetic parameters of No.0 fuel oil and Pinghu crude oil water-accommodated fractions (WAFs) during accumulation and elimination in Exopalaemon carinicauda were quantified using a semi-static two-compartment kinetic model. The accumulation phase data were analyzed via nonlinear regression to obtain kinetic parameters, yielding critical values including the uptake rate constant (k1), elimination rate constant (k2), bioconce...

Acute hepatopancreatic necrosis disease (AHPND), caused by the bacterium Vibrio parahaemolyticus, is a major threat to global shrimp aquaculture. In this study, we evaluated the therapeutic effects of phage therapy in Litopenaeus vannamei challenged with AHPND-causing Vibrio parahaemolyticus. Phage application at various concentrations significantly improved shrimp survival, with the 1 ppm group demonstrating the highest survi...

Hydropower infrastructure has profoundly altered riverine connectivity, posing challenges to the migratory behavior of aquatic species. This study examined the post-passage migration efficiency of Schizothorax wangchiachii in a regulated river system, focusing on upstream and downstream reaches of the Songxin Hydropower Station on the Heishui River, a tributary of the Jinsha River. We used radio-frequency identification (RFID)...

Astragalus and ginseng, esteemed as traditional Chinese herbal medicines, have demonstrated the ability to bolster physical health and enhance the immune function of organisms. In this study, the effects of a dietary astragalus–ginseng mixture on the growth performance, intestinal health, and nonspecific immunity of yellow catfish (Pelteobagrus fulvidraco) were evaluated, by measuring growth performance indices, intestinal vil...

Sthenoteuthis oualaniensis is one of the most commercially important marine cephalopod species distributed throughout tropical and subtropical waters of the Indo-Pacific Seas. The Indian Ocean is a main fishing ground for S. oualaniensis with a high population density. To explore the distribution of S. oualaniensis in the east equatorial Indian Ocean, four surveys were carried out using light-lift-net fishing vessels. Meanwhil...

To systematically evaluate FB’s effects on tilapia muscle quality, two distinct experimental phases are designed, the crispy texture development phase (0–16 weeks) and the crispy texture retention phase (17–24 weeks), which can determine the minimum faba bean (FB) feeding duration required to achieve optimal textural modification and can assess the persistence of improved textural properties following FB withdrawal, respective...

Vibrio harveyi is an important pathogen causing enteritis in hybrid groupers. However, its effects on the intestinal microbiota and the regulatory effects of oligochitosan on Vibrio-infected groupers are unclear. In this study, we investigated the effects of infection with V. harveyi and oligochitosan administration on the growth performance, immune responses, and intestinal transcriptome profiles of hybrid groupers during a 6...

Weight information plays a pivotal role in sturgeon breeding and production management. However, manual measurement is time consuming and labor intensive due to the immense size of the sturgeon. Due to the unique body shape of the sturgeon, traditional image segmentation algorithms struggle to extract the necessary features from sturgeon images, which makes them unsuitable for this particular species. Moreover, accurately meas...