M. J. Patterson results 123
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Acorn woodpeckers alter resource use, group size, and spring productivity across an urban landscapeNARA Subscribed
Access to suitable resources shapes the evolution and maintenance of avian cooperative breeding by influencing whether an individual will have a greater chance of survival and reproduction by dispersing or remaining on a natal territory. Cooperatively-breeding species exhibit altered dispersal according to food availability and habitat quality, but the relationship between resource use, group size, and reproduction in human-al...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
SNAPSHOT USA 2024: Year 6 of the Coordinated National Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multi‐contributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of speci...
Quantifying animal movements is necessary for answering a wide array of research questions in ecology and conservation biology. Consequently, ecologists have made considerable efforts to identify the best way to estimate an animal's home range, and many methods of estimating home ranges have arisen over the past half a century. Most of these methods fall into two distinct categories of estimators that have only recently been d...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Marine megafauna species are affected by a wide range of anthropogenic threats. To evaluate the risk of such threats, species’ vulnerability to each threat must first be determined. We build on the existing threats classification scheme and ranking system of the International Union for Conservation of Nature (IUCN) Red List of Threatened Species by assessing the vulnerability of 256 marine megafauna species to 23 at‐sea threat...
Satellite tagging of whale sharks ( Rhincodon typus) has typically focused on juvenile males which dominate coastal aggregation sites, with limited data on the movements of females. We satellite-tagged 39 whale sharks of 3.75–9.27 m total length at Ningaloo reef between 2015 and 2018 with a roughly equivalent sex ratio (Male = 20, Female = 18, Unknown = 1).We aimed to identify differences in horizontal and vertical movements b...
Reservoirs serve critical roles providing drinking water, irrigation, flood control, hydropower, recreation, fisheries, and aquatic habitat. Yet their physical position, complex shape, and large watersheds make reservoirs especially susceptible to eutrophication and harmful algal bloom (HAB) production. Boysen Reservoir, WY, is a high priority for proactive nutrient management because it is an important source for drinking wat...
Spatiotemporal Dynamics of Non‐Ecological Speciation in Rubyspot Damselflies ( Hetaerina spp.)NARA Subscribed
Non‐ecological speciation is a common mode of speciation, which occurs when allopatric lineages diverge in the absence of pronounced ecological differences. Yet, relative to other speciation mechanisms, non‐ecological speciation remains understudied. Numerous damselfly clades are characterised as non‐adaptive radiations (the result of several rounds of non‐ecological speciation without subsequent divergence), but there are few...
The effect of local perennial plants on the occurrence and traits of the Brachypodium distachyon complex along an aridity gradientNARA Subscribed
Plant-plant interactions are well-known drivers of plant community dynamics and plant traits. Less well known is to what extent these interactions and their effects change along stress gradients. To study this, we assessed the local spatial association of the annual grass species Brachypodium hybridum and Brachypodium distachyon to perennial plants in ten sites along an aridity gradient in southeastern Spain and compared ten p...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Ontogenetic change in body shape for white sharks, Carcharodon carcharias , in Australian watersNARA Subscribed
The analysis of how biological shape changes across ontogeny can provide us with valuable information on how species adapt behaviorally, physiologically, and ecologically. The white shark Carcharodon carcharias is one of the largest and most widely distributed apex predators globally, yet an understanding of ontogenetic changes in body shape and relative scaling of length and weight measures is limited, especially in relation...
Observing air-sea interactions on a global scale is essential for improving Earth system forecasts. Yet these exchanges are challenging to quantify for a range of reasons, including extreme conditions, vast and remote under-sampled locations, requirements for a multitude of co-located variables, and the high variability of fluxes in space and time. Uncrewed Surface Vehicles (USVs) present a novel solution for measuring these c...
Predicting and assessing the impacts of COVID-19 disruption on marine science and sectors in AustraliaNARA Subscribed
By March 2020 coronavirus disease 2019 (COVID-19) was anticipated to present a major challenge to the work undertaken by scientists. This pandemic could be considered just one of the shocks that human society has had and will be likely to confront again in the future. As strategic thinking about the future can assist performance and planning of scientific research in the face of change, the pandemic presented an opportunity to...
SNAPSHOT USA 2019–2023: The First Five Years of Data From a Coordinated Camera Trap Survey of the United StatesNARA Subscribed
Motivation SNAPSHOT USA is an annual, multicontributor camera trap survey of mammals across the United States. The growing SNAPSHOT USA dataset is intended for tracking the spatial and temporal responses of mammal populations to changes in land use, land cover and climate. These data will be useful for exploring the drivers of spatial and temporal changes in relative abundance and distribution, as well as the impacts of specie...
Animals within social groups respond to costs and benefits of sociality by adjusting the proportion of time they spend in close proximity to other individuals in the group (cohesion). Variation in cohesion between individuals, in turn, shapes important group‐level processes such as subgroup formation and fission–fusion dynamics. Although critical to animal sociality, a comprehensive understanding of the factors influencing coh...