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Review and Synthesis: Peatland and Wetland Models Simulating CH4 Production, Oxidation and Transport PathwaysNARA Subscribed
Peatlands play an important role in the global methane (CH 4 ) cycle and models are key tools to assess global change effects on CH 4 processes. It remains unclear how well existing wetland modelling frameworks are suited to peatland questions. Therefore, we reviewed the published literature on 16 peatland and wetland models and reported spatial and temporal scales, spin-up periods for stabilization of different carbon pools,...
Interpretable deep learning reveals spatiotemporal MRI features of brain aging that align with neurodegenerationNARA Subscribed
Cortical thinning and atrophy are hallmarks of brain aging that have been characterized using magnetic resonance imaging (MRI). Brain aging involves many neuroanatomic features whose effects on brain structure remain unexplored. To address this challenge, we trained interpretable deep neural networks (DNNs) to estimate brain age (BA) from T 1 -weighted ( T 1 w) MRI. By identifying MRI features unapparent to humans, DNNs can fi...
Alzheimer’s disease (AD) disproportionately affects women and carriers of the apolipoprotein E ε4 allele (APOE4), yet little is known about how sex and APOE interact to influence white matter (WM) integrity during disease progression. We integrated diffusion MRI and matched blood transcriptomic data to investigate these interactions and their underlying biological mechanisms. WM microstructure was quantified using diffusion te...
Predicting the progression of MCI and Alzheimer’s disease on structural brain integrity and other features with machine learningNARA Subscribed
Machine learning (ML) on structural MRI data shows high potential for classifying Alzheimer’s disease (AD) progression, but the specific contribution of brain regions, demographics, and proteinopathy remains unclear. Using Alzheimer’s Disease Neuroimaging Initiative (ADNI) data, we applied an extreme gradient-boosting algorithm and SHAP (SHapley Additive exPlanations) values to classify cognitively normal (CN) older adults, th...
Mathematical and statistical models underlie many of the world's most important fisheries management decisions. Since the 19th century, difficulty calibrating and fitting such models has been used to justify the selection of simple, stationary, single‐species models to aid tactical fisheries management decisions. Whereas these justifications are reasonable, it is imperative that we quantify the value of different levels of mod...
Deoxygenation following coral spawning and low-level thermal stress trigger mass coral mortality at Coral Bay, Ningaloo ReefNARA Subscribed
Oxygen depletion is well recognized for its role in the degradation of tropical coral reefs. Extreme acute hypoxic events that lead to localized mass mortality and the formation of ‘dead zones’ (a region where few or no organisms can survive due to a lack of oxygen) are particularly concerning as they can result in wide-ranging losses of biodiversity, ecosystem productivity and functioning, economic prosperity, and wellbeing....
Extreme climatic events can reshape the functional structure of ecological communities, potentially altering ecological interactions and ecosystem functioning. While these shifts have been widely documented, evidence of their persistence and potential flow‐on effects on ecosystem structure following relaxation of extreme events remains limited. Here, we investigate changes in the functional trait structure – encompassing dimen...
Effects of human footprint and biophysical factors on the body‐size structure of fished marine speciesNARA Subscribed
Marine fisheries in coastal ecosystems in many areas of the world have historically removed large‐bodied individuals, potentially impairing ecosystem functioning and the long‐term sustainability of fish populations. Reporting on size‐based indicators that link to food‐web structure can contribute to ecosystem‐based management, but the application of these indicators over large (cross‐ecosystem) geographical scales has been lim...
Global population projections foresee the biggest increase to occur in Africa with most of the available uncultivated land to ensure food security remaining on the continent. Simultaneously, greenhouse gas emissions are expected to rise due to ongoing land use change, industrialisation, and transport amongst other reasons with Africa becoming a major emitter of greenhouse gases globally. However, distinct knowledge on greenhou...
Marine reserves are a key tool for the conservation of marine biodiversity, yet only ~2.5% of the world's oceans are protected. The integration of marine reserves into connected networks representing all habitats has been encouraged by international agreements, yet the benefits of this design has not been tested empirically. Australia has one of the largest systems of marine reserves, providing a rare opportunity to assess how...
COSORE: A community database for continuous soil respiration and other soil‐atmosphere greenhouse gas flux dataNARA Subscribed
Globally, soils store two to three times as much carbon as currently resides in the atmosphere, and it is critical to understand how soil greenhouse gas (GHG) emissions and uptake will respond to ongoing climate change. In particular, the soil‐to‐atmosphere CO 2 flux, commonly though imprecisely termed soil respiration ( R S ), is one of the largest carbon fluxes in the Earth system. An increasing number of high‐frequency R S...
A common challenge for studying wildlife populations occurs when different survey methods provide inconsistent or incomplete inference on the trend, dynamics, or viability of a population. A potential solution to the challenge of conflicting or piecemeal data relies on the integration of multiple data types into a unified modeling framework, such as integrated population models ( IPM s). IPM s are a powerful approach for speci...
Metabolic theory and body size constraints on biomass production and decomposition suggest that differences in the intrinsic potential net ecosystem production ( NEP POT ) should be small among contrasting C 3 grasslands and therefore unable to explain the wide range in the annual apparent net ecosystem production ( NEP APP ) reported by previous studies. We estimated NEP POT for nine C 3 grasslands under contrasting climate a...