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Global Ecology and Biogeography · 2012 · Vol. 21 · Issue 2 · Wiley
Aim We conducted a meta‐analysis of species–area relationships (SARs) by combining several data sets and important covariates such as types of islands, taxonomic groups, latitude and spatial extent, in a hierarchical model framework to study global pattern and local variation in SARs and its consequences for prediction. Location One thousand nine hundred and eighteen islands from 94 SAR studies from around the world. Methods W...
Ecology · 2010 · Vol. 91 · Issue 2 · Wiley
When detection or occupancy probability is small or when the number of sites and number of visits per site is small, maximum likelihood estimators (MLE) of site occupancy parameters have large biases, are numerically unstable, and the corresponding confidence intervals have smaller than nominal coverage. We propose an alternative method of estimation, based on penalized likelihood. This method is numerically stable, the estima...
Ecology · 2009 · Vol. 90 · Issue 2 · Wiley
Hierarchical statistical models are increasingly being used to describe complex ecological processes. The data cloning (DC) method is a new general technique that uses Markov chain Monte Carlo (MCMC) algorithms to compute maximum likelihood (ML) estimates along with their asymptotic variance estimates for hierarchical models. Despite its generality, the method has two inferential limitations. First, it only provides Wald‐type...
Marine Mammal Science · 2008 · Vol. 24 · Issue 1 · Wiley
Numerical characterization of animal body forms using elliptical Fourier decomposition may be a useful analytic technique in a variety of marine mammal investigations. Using data collected from the Weddell seal ( Leptonychotes weddellii ), we describe the method of body form characterization using elliptical Fourier analysis and demonstrated usefulness of the technique in photogrammetric mass‐estimation modeling. We compared p...
Ecology Letters · 2007 · Vol. 10 · Issue 7 · Wiley
We introduce a new statistical computing method, called data cloning, to calculate maximum likelihood estimates and their standard errors for complex ecological models. Although the method uses the Bayesian framework and exploits the computational simplicity of the Markov chain Monte Carlo (MCMC) algorithms, it provides valid frequentist inferences such as the maximum likelihood estimates and their standard errors. The inferen...